Publications

You can find the complete publication list on my -> Google Scholar profile <-.

Books, Edited Books, Book Chapters

Three-dimensional quantification of the morphology and intragranular void ratio of a shelly carbonate sand J. Fonseca, C. C. Reyes-Aldasoro, L. Wils Published in Deformation Characteristics of Geomaterials, October 2016 (see publication) Research themes: Image Processing Type: Book Chapter

Image-based investigation into the primary fabric of stress-transmitting particles in sand J. Fonseca, C. C. Reyes-Aldasoro, C. O׳Sullivan, M. R. Coop Published in Geomechanics from Micro to Macro, August 2014 (see publication) Research themes: Image Processing Type: Book Chapter

Digital Pathology: 15th European Congress, ECDP 2019, Warwick, UK, April 10–13, 2019, Proceedings Constantino Carlos Reyes-Aldasoro, A Janowczyk, M Veta, P Bankhead, K Sirinukunwattana. Published in ECDP2019, January 2019 (see publication) Research themes: Medical Imaging Type: Book Chapter

Biomedical Image Analysis Recipes in MATLAB: For Life Scientists and Engineers C. C. Reyes-Aldasoro Published in Wiley, June 2015 (see publication) Research themes: Image Processing, Medical Imaging Type: Book

Haemodynamics and Oxygenation of the Tumour Microcirculation Gillian M. Tozer, Rachel Daniel, Sarah Jane Lunt, Constantino C. Reyes-Aldasoro, Vincent J. Cunningham Published in Advances in Intravital Microscopy, September 2014 (see publication) Research themes: Cancer, Circulation Type: Book Chapter

Medical Image Understanding and Analysis - MIUA 2014. 18th Annual Conference Greg Slabaugh, Constantino Carlos Reyes-Aldasoro Published in miua2014, July 2014 (see publication) Research themes: Medical Imaging Type: Book Chapter

Volumetric Texture Analysis in Biomedical Imaging Constantino Carlos Reyes-Aldasoro, Abhir Bhalerao Published in Biomedical Diagnostics and Clinical Technologies: Applying High-Performance Cluster and Grid Computing, January 2011 (see publication) Research themes: Medical Imaging, Texture Type: Book Chapter

2024

Fat-U-Net: Non-Contracting U-Net for Free-Space Optical Neural Networks Riad Ibadulla, Constantino Carlos Reyes-Aldasoro, Thomas M. Chen" Published in AI and Optical Data Sciences V, January 2024 (see publication) Research themes: Image Processing, Machine Learning, AI, Deep Learning, Microscopy Type: Conference

2023

FatNet: High-Resolution Kernels for Classification Using Fully Convolutional Optical Neural Networks Riad Ibadulla, Thomas M. Chen, Constantino Carlos Reyes-Aldasoro" Published in AI, March 2023 (see publication) Research themes: Image Processing, Machine Learning, AI, Deep Learning, Microscopy Type: Paper

2022

FatNet: High Resolution Kernels for Classification Using Fully Convolutional Optical Neural Networks Riad Ibadulla, Thomas M. Chen, Constantino Carlos Reyes-Aldasoro Published in arXiv, October 2022 (see publication) Research themes: Image Processing, Machine Learning, AI, Deep Learning, Microscopy Type: Pre-print

2016

Three-dimensional quantification of the morphology and intragranular void ratio of a shelly carbonate sand J. Fonseca, C. C. Reyes-Aldasoro, L. Wils Published in Deformation Characteristics of Geomaterials, October 2016 (see publication) Research themes: Image Processing Type: Book Chapter

2014

Image-based investigation into the primary fabric of stress-transmitting particles in sand J. Fonseca, C. C. Reyes-Aldasoro, C. O׳Sullivan, M. R. Coop Published in Geomechanics from Micro to Macro, August 2014 (see publication) Research themes: Image Processing Type: Book Chapter

2011

Activation of hypoxia-inducible factor-1α (Hif-1α) delays inflammation resolution by reducing neutrophil apoptosis and reverse migration in a zebrafish inflammation model Philip M. Elks, Fredericus J. van Eeden, Giles Dixon, Xingang Wang, Constantino Carlos Reyes-Aldasoro, Philip W. Ingham, Moira K. B. Whyte, Sarah R. Walmsley, Stephen A. Renshaw Published in Blood, July 2011 (see publication) Research themes: Cell Migration Type: Paper

2024

Dynamic analysis of the effects of vehicle movement over bridges observed with CCTV images Alfredo Camara, Constantino Carlos Reyes-Aldasoro Published in Engineering Structures, July 2024 (see publication) Research themes: Image Processing, Machine Learning, AI, Deep Learning, Microscopy Type: Journal

A multidisciplinary team and multiagency approach for AI implementation: A commentary for medical imaging and radiotherapy key stakeholders Nikolaos Stogiannos, Caitlin Gillan, Helle Precht, Claudia sa dos Reis, Amrita Kumar, Tracy O'Regan, Vanessa Ellis, Anna Barnes, Richard Meades, Michael Pogose, Julien Greggio, Erica Scurr, Shamie Kumar, Graham King, David Rosewarne, Catherine Jones, Kicky G. van Leeuwen, Emma Hyde, Charlotte Beardmore, Juan Gutierrez Alliende, Samar El-Farra, Stamatia Papathanasiou, Jan Beger, Jonathan Nash, Peter van Ooijen, Christiane Zelenyanszki, Barbara Koch, Keith Antony Langmack, Richard Tucker, Vicky Goh, Tom Turmezei, Gerald Lip, Constantino Carlos Reyes-Aldasoro, Eduardo Alonso, Geraldine Dean, Shashivadan P. Hirani, Sofia Torre, Theophilus N. Akudjedu, Benard Ohene-Botwe, Ricardo Khine, Chris O'Sullivan, Yiannis Kyratsis, Mark McEntee, Peter Wheatstone, Yvonne Thackray, James Cairns, Derek Jerome, Andrew Scarsbrook, Christina Malamateniou Published in Journal of Medical Imaging and Radiation Sciences, July 2024 (see publication) Research themes: Image Processing, Machine Learning, AI, Deep Learning, Microscopy Type: Journal

International Classification of Diseases Prediction from MIMIIC-III Clinical Text Using Pre-Trained ClinicalBERT and NLP Deep Learning Models Achieving State of the Art Ilyas Aden, Christopher H T Child, Constantino Carlos Reyes-Aldasoro, Published in Big Data and Cognitive Computing, May 2024 (see publication) Research themes: Image Processing, Machine Learning, AI, Deep Learning, Microscopy Type: Paper

DRD-UNet, a UNet-like architecture for multi-class breast cancer semantic segmentation Mauricio Alberto Ortega-Ruiz, Cefa Karabağ, Edgar Roman-Rangel, Constantino Carlos Reyes-Aldasoro Published in IEEE Access, March 2024 (see publication) Research themes: Cancer, Machine Learning, AI, Deep Learning, Microscopy Type: Paper

Pulses of Class I PI3kinase activity identify the release and recapture of prey from neutrophil phagosomes Clare Felicia Muir, Constantino Carlos Reyes-Aldasoro, Felix Ellett, Tomasz Prajsnar, Yin Xin Ho, Audrey Bernut, Catherine A Loynes, Stone Elworthy, Kieran A Bowden, Ashley J Cadby, Lynne Prince, Jason S King, Alison M Condliffe, Stephen Renshaw" Published in bioRxiv, February 2024 (see publication) Research themes: Cell Migration Type: Pre-Print

Editorial: Quantitative imaging methods and analysis in Alzheimer’s disease assessment Stephanos Leandrou1, Deqiang Qiu, Constantino Carlos Reyes-Aldasoro Published in Frontiers in Aging Neuroscience, January 2024 (see publication) Research themes: Medical Imaging Type: Paper

Dynamic analysis of the effects of vehicle movement over bridges observed with CCTV images Alfredo Camara, Constantino Carlos Reyes-Aldasoro Published in Engrxiv, January 2024 (see publication) Research themes: Image Processing, Machine Learning, AI, Deep Learning, Microscopy Type: Pre-print

2023

Modelling the Tumour Microenvironment, but What Exactly Do We Mean by “Model”? Constantino Carlos Reyes-Aldasoro Published in Cancers, July 2023 (see publication) Research themes: Cancer Type: Paper

Modelling the Tumour Microenvironment, but What Exactly Do We Mean by “Model”? Constantino Carlos Reyes-Aldasoro Published in PrePrints, June 2023 (see publication) Research themes: Cancer Type: Pre-print

PLPose: An Efficient Framework for Detecting Power Lines via Key Points-based Pose Estimation Rabeea Jaffari, Manzoor Ahmed Hashmani, Constantino Carlos Reyes-Aldasoro, Aisha Zahid Junejo, Hasmi Taib, M Nasir B Abdullah Published in Journal of King Saud University-Computer and Information Sciences, June 2023 (see publication) Research themes: Image Processing, Machine Learning, AI, Deep Learning, Microscopy Type: Paper

Non-calcified plaque-based coronary stenosis grading in contrast enhanced CT Muhammad Moazzam Jawaid, Sanam Narejo, Farhan Riaz, Constantino Carlos Reyes-Aldasoro, Greg Slabaugh, James Brown Published in Medical Engineering & Physics, May 2023 (see publication) Research themes: Circulation, Medical Imaging Type: Paper

Structural complexity of brain regions in mild cognitive impairment and Alzheimers disease Roni Tibon, Christopher R Madan, Delshad Vaghari, Constantino Carlos Reyes-Aldasoro Published in medRxiv, April 2023 (see publication) Research themes: Medical Imaging Type: Pre-print

Contrastive counterfactual visual explanations with overdetermination Adam White, Kwun Ho Ngan, James Phelan, Kevin Ryan, Saman Sadeghi Afgeh, Constantino Carlos Reyes-Aldasoro, Artur d'Avila Garcez Published in Machine Learning, March 2023 (see publication) Research themes: Image Processing, Machine Learning, AI, Deep Learning, Microscopy Type: Paper

Impact of Training Data, Ground Truth and Shape Variability in the Deep Learning-Based Semantic Segmentation of HeLa Cells Observed with Electron Microscopy Cefa Karabağ, Mauricio Alberto Ortega-Ruíz, Constantino Carlos Reyes-Aldasoro" Published in Journal of Imaging, March 2023 (see publication) Research themes: Cancer, Machine Learning, AI, Deep Learning, Microscopy Type: Paper

2022

Volumetric Semantic Instance Segmentation of the Plasma Membrane of HeLa Cells Azucena Ascencio-Cabral, Constantino Carlos Reyes-Aldasoro" Published in Journal of Imaging, September 2022 (see publication) Research themes: Machine Learning, AI, Deep Learning, Medical Imaging, Microscopy Type: Paper

Computational Image Analysis Techniques, Programming Languages and Software Platforms Used in Cancer Research: A Scoping Review Youssef Arafat, Constantino Carlos Reyes-Aldasoro" Published in Lecture Notes in Computer Science, July 2022 (see publication) Research themes: Cancer, Machine Learning, AI, Deep Learning, Medical Imaging, Microscopy Type: Paper

2021

Automatic Gemstone Classification Using Computer Vision Bona Hiu Yan Chow, Constantino Carlos Reyes-Aldasoro, Published in Minerals, December 2021 (see publication) Research themes: Image Processing, Machine Learning, AI, Deep Learning, Microscopy Type: Paper

Detection of Pitt–Hopkins Syndrome Based on Morphological Facial Features Elena D'Amato, Constantino Carlos Reyes-Aldasoro, Arianna Consiglio, Gabriele D’Amato, Maria Felicia Faienza, Marcella Zollino Published in Applied Sciences, December 2021 (see publication) Research themes: Image Processing Type: Paper

Contrastive Counterfactual Visual Explanations With Overdetermination Adam White, Kwun Ho Ngan, James Phelan, Saman Sadeghi Afgeh, Kevin Ryan, Constantino Carlos Reyes-Aldasoro, Artur d'Avila Garcez Published in arXiv, September 2021 (see publication) Research themes: Image Processing, Machine Learning, AI, Deep Learning, Microscopy Type: Pre-print

Classification and Visualisation of Normal and Abnormal Radiographs; A Comparison between Eleven Convolutional Neural Network Architectures Ananda Ananda, Kwun Ho Ngan, Cefa Karabağ, Aram Ter-Sarkisov, Eduardo Alonso, Constantino Carlos Reyes-Aldasoro Published in Sensors (Basel), September 2021 (see publication) Research themes: Machine Learning, AI, Deep Learning, Medical Imaging, Microscopy Type: Journal

Special Issue on Computational Pathology: An Overview Anant Madabhushi, Constantino Carlos Reyes-Aldasoro Published in Medical Image Analysis, June 2021 (see publication) Research themes: Cancer, Machine Learning, AI, Deep Learning, Microscopy Type: Paper

Volumetric Semantic Instance Segmentation of the Plasma Membrane of HeLa Cells Cefa Karabağ, Martin L. Jones, Constantino Carlos Reyes-Aldasoro" Published in Journal of Imaging, June 2021 (see publication) Research themes: Cancer, Machine Learning, AI, Deep Learning, Microscopy Type: Paper

A Novel Focal Phi Loss for Power Line Segmentation with Auxiliary Classifier U-Net Rabeea Jaffari, Manzoor Ahmed Hashmani, Constantino Carlos Reyes-Aldasoro Published in Sensors (Basel), April 2021 (see publication) Research themes: Image Processing, Machine Learning, AI, Deep Learning, Microscopy Type: Paper

2020

Automatic Analysis of Bees’ Waggle Dance Jordan Reece, Margaret Couvillon, Christoph Grüter, Francis Ratnieks, Constantino Carlos Reyes-Aldasoro Published in bioRxiv, November 2020 (see publication) Research themes: Image Processing Type: Pre-print

Cell Tracking Profiler - a user-driven analysis framework for evaluating 4D live-cell imaging data Claire Mitchell, Lauryanne Caroff, andJose Alonso Solis-Lemus, Constantino Carlos Reyes-Aldasoro, Alessandra Vigilante, Fiona Warburton, Fabrice de Chaumont, Alexandre Dufour, Stephane Dallongeville, Jean-Christophe Olivo-Marin, Robert Knight Published in Journal of Cell Science, November 2020 (see publication) Research themes: Cell Migration Type: Paper

Experimental Assessment of Color Deconvolution and Color Normalization for Automated Classification of Histology Images Stained with Hematoxylin and Eosin Francesco Bianconi, Jakob N. Kather, Constantino Carlos Reyes-Aldasoro Published in Cancers, November 2020 (see publication) Research themes: Cancer Type: Paper

Radiography Classification: A Comparison between Eleven Convolutional Neural Networks Ananda Ananda, Cefa Karabağ, Aram Ter-Sarkisov, Eduardo Alonso, Constantino Carlos Reyes-Aldasoro Published in Fourth International Conference on Multimedia Computing, Networking and Applications (MCNA), October 2020 (see publication) Research themes: Medical Imaging Type: Conference

Morphological Estimation of Cellularity on Neo-Adjuvant Treated Breast Cancer Histological Images Mauricio Alberto Ortega-Ruiz, Cefa Karabağ, Victor García Garduño, Constantino Carlos Reyes-Aldasoro Published in Journal of Imaging, October 2020 (see publication) Research themes: Cancer, Machine Learning, AI, Deep Learning, Microscopy Type: Paper

Semantic segmentation of HeLa cells An objective comparison between one traditional algorithm and four deep-learning architectures Cefa Karabağ, Martin Jones, Christopher J. Peddie, Anne E Weston, Lucy M Collinson, Constantino Carlos Reyes-Aldasoro" Published in PLoS ONE, October 2020 (see publication) Research themes: Cancer, Machine Learning, AI, Deep Learning, Microscopy Type: Paper

Geometric semi-automatic analysis of radiographs of Colles’ fractures Constantino Carlos Reyes-Aldasoro, Kwun Ho Ngan, Ananda Ananda, Artur d’Avila Garcez, Andrew Appelboam, Karen M. Knapp Published in PLoS ONE, September 2020 (see publication) Research themes: Machine Learning, AI, Deep Learning, Microscopy Type: Paper

Prophase-Specific Perinuclear Actin Coordinates Centrosome Separation and Positioning to Ensure Accurate Chromosome Segregation Tom Stiff, Fabio R. Echegaray-Iturra, Harry J. Pink, Alex Herbert, Constantino Carlos Reyes-Aldasoro, Helfrid Hochegger Published in Cell Reports, May 2020 (see publication) Research themes: Cancer Type: Paper

Comparative Study of Contact Repulsion in Control and Mutant Macrophages Using a Novel Interaction Detection José Alonso Solís-Lemus, Besaiz J. Sánchez-Sánchez, Stefania Marcotti, Mubarik Burki, Brian Stramer, Constantino Carlos Reyes-Aldasoro Published in Journal of Imaging, May 2020 (see publication) Research themes: Cell Migration Type: Paper

Geometric differences between nuclear envelopes of Wild-type and Chlamydia trachomatis-infected HeLa cells Cefa Karabağ, Martin L. Jones, Christopher J. Peddie, Anne E. Weston, Lucy M. Collinson, Constantino Carlos Reyes-Aldasoro, Published in bioRxiv, April 2020 (see publication) Research themes: Cancer, Machine Learning, AI, Deep Learning, Microscopy Type: Pre-print

The relationship between Fully Connected Layers and number of classes for the analysis of retinal images Ajna Ram, Constantino Carlos Reyes-Aldasoro Published in arXiv, March 2020 (see publication) Research themes: Image Processing, Machine Learning, AI, Deep Learning, Medical Imaging, Microscopy Type: Pre-print

Detection of Pitt-Hopkins Syndrome based on morphological facial features Elena D'Amato, Constantino Carlos Reyes-Aldasoro, Maria Felicia Faienza, Marcella Zollino Published in arXiv, March 2020 (see publication) Research themes: Image Processing Type: Pre-print

A machine learning approach for Colles’ fracture treatment diagnosis Kwun Ho Ngan, Artur d’Avila Garcez, Karen M. Knapp, Andy Appelboam, Constantino Carlos Reyes-Aldasoro Published in bioRxiv, March 2020 (see publication) Research themes: Medical Imaging Type: Pre-print

2019

Making densenet interpretable a case study in clinical radiology Kwun Ho Ngan, Artur d’Avila Garcez, Karen M. Knapp, Andy Appelboam, Constantino Carlos Reyes-Aldasoro Published in medRxiv, December 2019 (see publication) Research themes: Medical Imaging Type: Pre-print

Effect of Viscosity and Speed on Oil Cavitation Development in a Single Piston-Ring Lubricant Assembly Jamshid M. Nouri, Ioannis Vasilakos, Youyou Yan, Constantino-Carlos Reyes-Aldasoro Published in Lubricants, October 2019 (see publication) Research themes: Image Processing Type: Paper

β-glucan-dependent shuttling of conidia from neutrophils to macrophages occurs during fungal infection establishment Vahid Pazhakh, Felix Ellett, Ben A. Croker, Joanne A. O'Donnell, Luke Pase, Keith E. Schulze, R. Stefan Greulich, Aakash Gupta, Constantino Carlos Reyes-Aldasoro, Alex Andrianopoulos, Graham J. Lieschke Published in PLoS Biology, September 2019 (see publication) Research themes: Cell Migration Type: Paper

Segmentation and Modelling of the Nuclear Envelope of HeLa Cells Imaged with Serial Block Face Scanning Electron Microscopy Cefa Karabağ, Martin L. Jones, Christopher J. Peddie, Anne E. Weston, Lucy M. Collinson, Reyes-Aldasoro, Constantino Carlos Published in Journal of Imaging, September 2019 (see publication) Research themes: Cancer Type: Paper

Asymmetries in speech articulation as reflected on palatograms: A meta-study Jo Verhoeven, Peter Mariën, Ilke De Clerck, Luc Daems, Constantino Carlos Reyes-Aldasoro, Naomi Rachel Miller Published in Proceedings of the 19th International Congress of Phonetic Sciences, August 2019 (see publication) Research themes: Image Processing, Phonetics Type: Conference

Asymmetries in tongue-palate contact during speech Jo Verhoeven, Naomi Rachel Miller, Luc Daems, Constantino Carlos Reyes-Aldasoro Published in Proceedings of the 19th International Congress of Phonetic Sciences., August 2019 (see publication) Research themes: Image Processing, Phonetics Type: Conference

Segmentation And Modelling of HeLa Nuclear Envelope C. Karabağ, M.L. Jones, C.J. Peddie, A.E. Weston, L.M. Collinson, C.C. Reyes-Aldasoro Published in ISBI, April 2019 (see publication) Research themes: Cancer, Medical Imaging Type: Conference

Visualisation and Analysis of Speech Production with Electropalatography Jo Verhoeven, Naomi Rachel Miller, Luc Daems, Constantino Carlos Reyes-Aldasoro Published in Journal of Imaging, March 2019 (see publication) Research themes: Image Processing, Phonetics Type: Paper

Predicting survival from colorectal cancer histology slides using deep learning A retrospective multicenter study Jakob Nikolas Kather, Johannes Krisam, Pornpimol Charoentong, Tom Luedde, Esther Herpel, Cleo-Aron Weis, Timo Gaiser, Alexander Marx, Nektarios A. Valous, Dyke Ferber, Lina Jansen, Constantino Carlos Reyes-Aldasoro, Inka Zörnig, Dirk Jäger, Hermann Brenner, Jenny Chang-Claude, Michael Hoffmeister, Niels Halama Published in PLoS Medicine, January 2019 (see publication) Research themes: Cancer, Machine Learning, AI, Deep Learning, Microscopy Type: Paper

Macrosight A Novel Framework to Analyze the Shape and Movement of Interacting Macrophages Using Matlab® José Alonso Solís-Lemus, Brian Stramer, Greg Slabaugh, Constantino Carlos Reyes-Aldasoro Published in Journal of Imaging, January 2019 (see publication) Research themes: Cell Migration Type: Paper

Digital Pathology: 15th European Congress, ECDP 2019, Warwick, UK, April 10–13, 2019, Proceedings Constantino Carlos Reyes-Aldasoro, A Janowczyk, M Veta, P Bankhead, K Sirinukunwattana. Published in ECDP2019, January 2019 (see publication) Research themes: Medical Imaging Type: Book Chapter

Texture Segmentation An Objective Comparison between Five Traditional Algorithms and a Deep-Learning U-Net Architecture Cefa Karabağ, Jo Verhoeven, Naomi Rachel Miller, Constantino Carlos Reyes-Aldasoro Published in Applied Sciences, January 2019 (see publication) Research themes: Machine Learning, AI, Deep Learning, Microscopy, Texture Type: Paper

2018

Guest Editorial: Computer Vision in Cancer Data Analysis Greg Slabaugh, Constantino Carlos Reyes-Aldasoro Published in IET Computer Vision, November 2018 (see publication) Research themes: Cancer, Medical Imaging Type: Editorial

Generating Magnetic Resonance Spectroscopy Imaging Data of Brain Tumours from Linear, Non-linear and Deep Learning Models Nathan Olliverre, Guang Yang, Greg Slabaugh, Constantino Carlos Reyes-Aldasoro, Eduardo Alonso Published in MICCAI Sashimi, September 2018 (see publication) Research themes: Machine Learning, AI, Deep Learning, Medical Imaging, Microscopy Type: Conference

Morphological Analysis of Fenestrae in Arteries Muhammad Moazzam Jawaid, Francisco Ramirez-Perez, Antoine Plumerault, Flora Quilichini, Jose Alonso Solis-Lemus, Luis Martinez-Lemus, Constantino Carlos Reyes-Aldasoro Published in Emerging Technologies in Computing. First International Conference, iCETiC 2018, August 2018 (see publication) Research themes: Circulation, Image Processing Type: Conference

Analysis of the symmetry of electrodes for Electropalatography with Cone Beam CT Scanning Jo Verhoeven, Naomi Rachel Miller, Constantino Carlos Reyes-Aldasoro Published in Annual Conference on Medical Image Understanding and Analysis, August 2018 (see publication) Research themes: Image Processing, Phonetics Type: Conference

Shape analysis and tracking of migrating macrophages José Alonso Solís-Lemus, Brian Stramer, Greg Slabaugh, Constantino Carlos Reyes-Aldasoro Published in ISBI, April 2018 (see publication) Research themes: Cell Migration Type: Conference

Hippocampal and entorhinal cortex volume changes in Alzheimer’s disease patients and mild cognitive impairment subjects S. Leandrou, I. Mamais, S. Petroudi, P. A. Kyriacou, Constantino Carlos Reyes-Aldasoro, C.S. Pattichis Published in IEEE EMBS International Conference on Biomedical & Health Informatics (BHI), March 2018 (see publication) Research themes: Medical Imaging Type: Conference

Quantitative MRI Brain Studies in Mild Cognitive Impairment and Alzheimer’s Disease A Methodological Review Stephanos Leandrou, Styliani Petroudi, Panayiotis A. Kyriacou, Constantino Carlos Reyes-Aldasoro, Constantinos S. Pattichis Published in IEEE reviews in biomedical engineering, January 2018 (see publication) Research themes: Medical Imaging Type: Paper

Large-scale database mining reveals hidden trends and future directions for cancer immunotherapy Jakob Nikolas Kather, Anna Sophie Berghoff, Dyke Ferber, Meggy Suarez-Carmona, Constantino Carlos Reyes-Aldasoro, Nektarios A. Valous, Rodrigo Rojas-Moraleda, Dirk Jäger, Niels Halama Published in Oncoimmunology, January 2018 (see publication) Research themes: Cancer Type: Paper

Automated Quantification of Non-Calcified Coronary Plaques in Cardiac CT Angiographic Imagery M. Moazzam Jawaid, Sanam Narejo, Nasrullah Pirzada, Junaid Baloch, C. C. Reyes-Aldasoro, Greg Slabaugh Published in International Journal of Advanced Computer Science and Applications (IJACSA), January 2018 (see publication) Research themes: Circulation, Medical Imaging Type: Paper

2017

Segmentation and Shape Analysis of Macrophages Using Anglegram Analysis José Alonso Solís-Lemus, Brian Stramer, Greg Slabaugh, Constantino Carlos Reyes-Aldasoro Published in Journal of Imaging, December 2017 (see publication) Research themes: Type: Paper

An objective comparison of cell-tracking algorithms Ulman, Vladimír and Maška, Martin and Magnusson, Klas E. G. and Ronneberger, Olaf and Haubold, Carsten and Harder, Nathalie and Matula, Pavel and Matula, Petr and Svoboda, David and Radojevic, Miroslav and Smal, Ihor and Rohr, Karl and Jaldén, Joakim and Blau, Helen M. and Dzyubachyk, Oleh and Lelieveldt, Boudewijn and Xiao, Pengdong and Li, Yuexiang and Cho, Siu-Yeung and Dufour, Alexandre C. and Jean-Christophe Olivo-Marin, Constantino C. Reyes-Aldasoro, Jose A. Solis-Lemus, Robert Bensch, and Brox, Thomas and Stegmaier, Johannes and Mikut, Ralf and Wolf, Steffen and Hamprecht, Fred A. and Esteves, Tiago and Quelhas, Pedro and Demirel, Ömer and Malmström, Lars and Jug, Florian and Tomancak, Pavel and Meijering, Erik and Muñoz-Barrutia, Arrate and Kozubek, Michal and Ortiz-de-Solorzano, Carlos Published in Nature Methods, December 2017 (see publication) Research themes: Cell Migration Type: Paper

Framework for detection and localization of coronary non-calcified plaques in cardiac CTA using mean radial profiles Muhammad Moazzam Jawaid, Atif Riaz, Ronak Rajani, Constantino Carlos Reyes-Aldasoro, Greg Slabaugh Published in Computers in Biology and Medicine, October 2017 (see publication) Research themes: Circulation, Medical Imaging Type: Paper

A hybrid energy model for region based curve evolution - Application to CTA coronary segmentation Muhammad Moazzam Jawaid, Ronak Rajani, Panos Liatsis, Constantino Carlos Reyes-Aldasoro, Greg Slabaugh Published in Computer Methods and Programs in Biomedicine, June 2017 (see publication) Research themes: Circulation, Medical Imaging Type: Paper

The proportion of cancer-related entries in PubMed has increased considerably; is cancer truly ‘The Emperor of All Maladies’? Constantino Carlos Reyes-Aldasoro Published in PLoS ONE, January 2017 (see publication) Research themes: Cancer Type: Paper

2016

Image-based investigation into the primary fabric of stress-transmitting particles in sand J. Fonseca, S. Nadimi, C. C. Reyes-Aldasoro, C. O׳Sullivan, M. R. Coop Published in Soils and Foundations, October 2016 (see publication) Research themes: Image Processing Type: Paper

Behavior Analysis of Ants from Video Sequences Alejandro Cartas, Maedeh Aghaei, Christoph Grüter, Francis L. W. Ratnieks, Constantino Carlos Reyes-Aldasoro Published in ICPR2016, April 2016 (see publication) Research themes: Image Processing Type: Conference

Maternal Hyperleptinemia Is Associated with Male Offspring’s Altered Vascular Function and Structure in Mice Kathleen A. Pennington, Francisco I. Ramirez-Perez, Kelly E. Pollock, Omonseigho O. Talton, Christopher A. Foote, Constantino C. Reyes-Aldasoro, Ho-Hsiang Wu, Tieming Ji, Luis A. Martinez-Lemus, Laura C. Schulz Published in PLoS ONE, January 2016 (see publication) Research themes: Circulation Type: Paper

Mapping tumour tissue: quantitative maps of histological whole slide images Kather, N. J., Weis, C. A., Zöllner, F. G. & Reyes-Aldasoro, C. C Published in Oncology News, January 2016 (see publication) Research themes: Cancer Type: Paper

Arterial Stiffening in Western Diet-Fed Mice Is Associated with Increased Vascular Elastin, Transforming Growth Factor-β, and Plasma Neuraminidase Christopher A. Foote, Jorge A. Castorena-Gonzalez, Francisco I. Ramirez-Perez, Guanghong Jia, Michael A. Hill, Constantino C. Reyes-Aldasoro, James R. Sowers, Luis A. Martinez-Lemus, Published in Frontiers in Physiology, January 2016 (see publication) Research themes: Circulation, Medical Imaging Type: Paper

2015

Special issue: medical image understanding and analysis Constantino Carlos Reyes-Aldasoro, Greg Slabaugh Published in Computer Methods in Biomechanics and Biomedical Engineering: Imaging & Visualization, November 2015 (see publication) Research themes: Medical Imaging Type: Editorial

Whole cell tracking through the optimal control of geometric evolution laws Konstantinos N. Blazakis, Anotida Madzvamuse, Constantino Carlos Reyes-Aldasoro, Vanessa Styles, Chandrasekhar Venkataraman Published in Journal of Computational Physics, September 2015 (see publication) Research themes: Cell Migration Type: Paper

Continuous representation of tumor microvessel density and detection of angiogenic hotspots in histological whole-slide images Jakob Nikolas Kather, Alexander Marx, Constantino Carlos Reyes-Aldasoro, Schad, Lothar R. and Zöllner, Frank Gerrit and Weis, Cleo-Aron Published in Oncotarget, August 2015 (see publication) Research themes: Cancer Type: Paper

Regional variation in arterial stiffening and dysfunction in Western diet-induced obesity Shawn B. Bender, Jorge A. Castorena-Gonzalez, Mona Garro, Constantino C. Reyes-Aldasoro, James R. Sowers, Vincent G. DeMarco, Luis A. Martinez-Lemus Published in American Journal of Physiology. Heart and Circulatory Physiology, August 2015 (see publication) Research themes: Circulation Type: Paper

Biomedical Image Analysis Recipes in MATLAB: For Life Scientists and Engineers C. C. Reyes-Aldasoro Published in Wiley, June 2015 (see publication) Research themes: Image Processing, Medical Imaging Type: Book

A Robust and Artifact Resistant Algorithm of Ultrawideband Imaging System for Breast Cancer Detection Tengfei Yin, Falah H. Ali, Constantino Carlos Reyes-Aldasoro Published in IEEE transactions on bio-medical engineering, June 2015 (see publication) Research themes: Cancer, Image Processing, Medical Imaging Type: Paper

Automatic segmentation of focal adhesions from mouse embryonic fibroblasts Constantino Carlos Reyes-Aldasoro, Muruj Barri, Majid Hafezparast Published in ISBI, April 2015 (see publication) Research themes: Cell Migration, Medical Imaging Type: Conference

2014

An in vivo role for Rho kinase activation in the tumour vascular disrupting activity of combretastatin A-4 3-O-phosphate L.J. Williams, D. Mukherjee, M Fisher, C. C. Reyes-Aldasoro, S. Akerman, C. Kanthou, G.M. Tozer Published in British Journal of Pharmacology, November 2014 (see publication) Research themes: Cancer Type: Paper

Homage to Professor Maria Petrou Xavier Llado, Atsushi Imiya, David Mason, Constantino Carlos Reyes-Aldasoro, Kazuaki Aoki, Mineichi Kudo, Yu-Jin Zhang, Vasileios Argyriou Published in Pattern Recognition Letters, October 2014 (see publication) Research themes: Image Processing Type: Paper

Haemodynamics and Oxygenation of the Tumour Microcirculation Gillian M. Tozer, Rachel Daniel, Sarah Jane Lunt, Constantino C. Reyes-Aldasoro, Vincent J. Cunningham Published in Advances in Intravital Microscopy, September 2014 (see publication) Research themes: Cancer, Circulation Type: Book Chapter

Medical Image Understanding and Analysis - MIUA 2014. 18th Annual Conference Greg Slabaugh, Constantino Carlos Reyes-Aldasoro Published in miua2014, July 2014 (see publication) Research themes: Medical Imaging Type: Book Chapter

Tumour cells expressing single VEGF isoforms display distinct growth, survival and migration characteristics Chryso Kanthou, Gabi U. Dachs, Diane V. Lefley, Andrew J. Steele, Claudia Coralli-Foxon, Sheila Harris, Olga Greco, Sofia A. Dos Santos, Constantino C. Reyes-Aldasoro, William R. English, Gillian M. Tozer Published in PLoS ONE, January 2014 (see publication) Research themes: Cancer, Cell Migration Type: Paper

2013

Influence of soluble or matrix-bound isoforms of vascular endothelial growth factor-A on tumor response to vascular-targeted strategies Simon Akerman, Matthew Fisher, Rachel A. Daniel, Diane Lefley, Constantino C. Reyes-Aldasoro, Sarah Jane Lunt, Sheila Harris, Meit Bjorndahl, Leigh J. Williams, Helen Evans, Paul R. Barber, Vivien E. Prise, Borivoj Vojnovic, Chryso Kanthou, Gillian M. Tozer Published in International Journal of Cancer, December 2013 (see publication) Research themes: Cancer Type: Paper

Cancer Image Analysis Reyes-Aldasoro, C. C Published in Oncology News, November 2013 (see publication) Research themes: Cancer Type: Paper

Cxcl8 (IL-8) mediates neutrophil recruitment and behavior in the zebrafish inflammatory response Sofia de Oliveira, Constantino C. Reyes-Aldasoro, Sergio Candel, Stephen A. Renshaw, Victoriano Mulero, Angelo Calado Published in Journal of Immunology, April 2013 (see publication) Research themes: Cell Migration Type: Paper

PhagoSight an open-source MATLAB® package for the analysis of fluorescent neutrophil and macrophage migration in a zebrafish model K.M. Henry, Luke Pase, C.F. Ramos-Lopez, Graham J. Lieschke, Stephen A. Renshaw, Constantino Carlos Reyes-Aldasoro Published in PLoS ONE, January 2013 (see publication) Research themes: Cell Migration Type: Paper

2012

Repelled from the wound, or randomly dispersed? Reverse migration behaviour of neutrophils characterized by dynamic modelling Geoffrey R. Holmes, Sean R. Anderson, Giles Dixon, Anne L. Robertson, Constantino Carlos Reyes-Aldasoro, Stephen A. Billings, Stephen A. Renshaw, Visakan Kadirkamanathan Published in Journal of the Royal Society Interface, December 2012 (see publication) Research themes: Type: Paper

Online chromatic and scale-space microvessel-tracing analysis for transmitted light optical images Constantino Carlos Reyes-Aldasoro, Meit A. Björndahl, Simon Akerman, Jamila Ibrahim, Michael K. Griffiths, Gillian M. Tozer Published in Microvascular Research, November 2012 (see publication) Research themes: Cancer, Circulation Type: Paper

Neutrophil-delivered myeloperoxidase dampens the hydrogen peroxide burst after tissue wounding in zebrafish Luke Pase, Judith E. Layton, Christine Wittmann, Felix Ellett, Cameron J. Nowell, Constantino Carlos Reyes-Aldasoro, Sony Varma, Kelly L. Rogers, Chris J. Hall, M. Cristina Keightley, Philip S. Crosier, Clemens Grabher, Joan K. Heath, Stephen A. Renshaw, Graham J. Lieschke Published in Current Biology, October 2012 (see publication) Research themes: Cell Migration Type: Paper

Local affine texture tracking for serial registration of zebrafish images Abhir Bhalerao, Luke Pase, Graham Lieschke, Stephen Renshaw, Constantino Carlos Reyes-Aldasoro Published in ISBI, May 2012 (see publication) Research themes: Cell Migration, Medical Imaging, Texture Type: Conference

The neutrophil’s eye-view inference and visualisation of the chemoattractant field driving cell chemotaxis in vivo Visakan Kadirkamanathan, Sean R. Anderson, Stephen A. Billings, Xiliang Zhang, Geoffrey R. Holmes, Constantino C. Reyes-Aldasoro, Philip M. Elks, Stephen A. Renshaw, Published in PLoS ONE, January 2012 (see publication) Research themes: Cell Migration Type: Paper

2011

Vascular effects dominate solid tumor response to treatment with combretastatin A-4-phosphate Sarah Jane Lunt, Simon Akerman, Sally A. Hill, Matthew Fisher, Victoria J. Wright, Constantino C. Reyes-Aldasoro, Gillian M. Tozer, Chryso Kanthou Published in International Journal of Cancer, October 2011 (see publication) Research themes: Cancer Type: Paper

Microflow of fluorescently labelled red blood cells in tumours expressing single isoforms of VEGF and their response to vascular targeting agents Simon Akerman, Constantino Carlos Reyes-Aldasoro, Matthew Fisher, Katie L. Pettyjohn, Meit A. Björndahl, Helen Evans, Gillian M. Tozer Published in Medical Engineering & Physics, September 2011 (see publication) Research themes: Cancer, Cell Migration, Circulation Type: Paper

CAIMAN an online algorithm repository for Cancer Image Analysis Constantino Carlos Reyes-Aldasoro, Michael K. Griffiths, Deniz Savas, Gillian M. Tozer Published in Computer Methods and Programs in Biomedicine, August 2011 (see publication) Research themes: Cancer, Circulation, Medical Imaging Type: Paper

An automatic algorithm for the segmentation and morphological analysis of microvessels in immunostained histological tumour sections C. C. Reyes-Aldasoro, L. J. Williams, S. Akerman, C. Kanthou, G. M. Tozer Published in Journal of Microscopy, June 2011 (see publication) Research themes: Cancer, Circulation Type: Paper

Volumetric Texture Analysis in Biomedical Imaging Constantino Carlos Reyes-Aldasoro, Abhir Bhalerao Published in Biomedical Diagnostics and Clinical Technologies: Applying High-Performance Cluster and Grid Computing, January 2011 (see publication) Research themes: Medical Imaging, Texture Type: Book Chapter

2010

Application of intravital microscopy in studies of tumor microcirculation Sarah Jane Lunt, Colin Gray, Constantino Carlos Reyes-Aldasoro, Stephen J. Matcher, Gillian M. Tozer Published in Journal of Biomedical Optics, February 2010 (see publication) Research themes: Cancer, Cell Migration, Circulation Type: Paper

2009

Analysis of immune cell function using in vivo cell shape analysis and tracking C. C. Reyes-Aldasoro, Y Zhao, D Coca, S. A. Billings, V. Kadirkamanathan, G. M. Tozer, S. A. Renshaw Published in 4th IAPR International Conference on Pattern Recognition in Bioinformatics, September 2009 (see publication) Research themes: Cell Migration Type: Conference

Retrospective shading correction algorithm based on signal envelope estimation C.C. Reyes-Aldasoro Published in Electronics Letters, April 2009 (see publication) Research themes: Medical Imaging Type: Paper

2008

Measuring cellular migration with image processing C. C. Reyes-Aldasoro, D. Biram, G. M. Tozer, C. Kanthou Published in Electronics Letters, June 2008 (see publication) Research themes: Cancer, Cell Migration Type: Paper

Blood vessel maturation and response to vascular-disrupting therapy in single vascular endothelial growth factor-A isoform-producing tumors Gillian M. Tozer, Akerman, Simon and Cross, Neil A. and Barber, Paul R. and Björndahl, Meit A. and Greco, Olga and Harris, Sheila and Hill, Sally A. and Honess, Davina J. and Ireson, Christopher R. and Pettyjohn, Katie L. and Prise, Vivien E. and Reyes-Aldasoro, Constantino C. and Ruhrberg, Christiana and Shima, David T, Chryso Kanthou Published in Cancer Research, April 2008 (see publication) Research themes: Cancer, Circulation Type: Paper

Measuring the velocity of fluorescently labelled red blood cells with a keyhole tracking algorithm C. C. Reyes-Aldasoro, G. M. Tozer Published in Journal of Microscopy, January 2008 (see publication) Research themes: Cancer, Circulation Type: Paper

Estimation of apparent tumor vascular permeability from multiphoton fluorescence microscopic images of P22 rat sarcomas in vivo Constantino Carlos Reyes-Aldasoro, Ian Wilson, Vivien E. Prise, Paul R. Barber, M. Ameer-Beg, Borivoj Vojnovic, Vincent J. Cunningham, Gillian M. Tozer Published in Microcirculation, January 2008 (see publication) Research themes: Cancer, Cell Migration, Circulation Type: Paper

2007

Volumetric texture segmentation by discriminant feature selection and multiresolution classification Constantino Carlos Reyes-Aldasoro, Abhir Bhalerao Published in IEEE Transactions on Medical Imaging, January 2007 (see publication) Research themes: Medical Imaging, Texture Type: Paper

2006

The Bhattacharyya space for feature selection and its application to texture segmentation Constantino Carlos Reyes-Aldasoro, Abhir Bhalerao Published in Pattern Recognition, May 2006 (see publication) Research themes: Medical Imaging, Texture Type: Paper

2003

Volumetric texture description and discriminant feature selection for MRI Constantino Carlos Reyes-Aldasoro, Abhir Bhalerao Published in Information Processing in Medical Imaging, July 2003 (see publication) Research themes: Medical Imaging, Texture Type: Conference

2000

A combined algorithm for image segmentation using neural networks and 3D surface reconstruction using dynamic meshes Constantino Carlos Reyes-Aldasoro, M. E. Algorri Published in Revista Mexicana de Ingeniería Biomédica, January 2000 (see publication) Research themes: Machine Learning, AI, Deep Learning, Medical Imaging, Microscopy Type: Paper

1999

Telecommunications and Internet in the future society: myths and realities C.C. Reyes-Aldasoro, F. Kuhlmann Published in IEEE International Symposium on Computers and Communications, July 1999 (see publication) Research themes: Image Processing Type: Conference

A hybrid model based on dynamic programming, neural networks, and surrogate value for inventory optimisation applications C. C. Reyes-Aldasoro, A. R. Ganguly, G. Lemus, A. and Gupta Published in Journal of the Operational Research Society, January 1999 (see publication) Research themes: Machine Learning, AI, Deep Learning, Microscopy Type: Paper